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  • mario31415May 26, 2009 6:20 PM PDT   
    Both Directions?
    Do we have to look for matches in both directions?

    Database=
    GTCCTG

    If we are looking for GTC is that one match at 0
    or two matches one at 0 and one at 3?

    Thanks

    akkiMay 27, 2009 6:24 AM PDT
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    		 #1
    Re: Both Directions?
    Quoting - mario31415
    Do we have to look for matches in both directions?

    Database=
    GTCCTG

    If we are looking for GTC is that one match at 0
    or two matches one at 0 and one at 3?

    Thanks


    If that were the case, I'm sure it would have been mentioned in the problem statement...


    mario31415May 27, 2009 8:12 AM PDT
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    		 #2 Reply To #1
    Re: Both Directions?
    Quoting - akki


    If that were the case, I'm sure it would have been mentioned in the problem statement...

    That makes sense, Thanks!

    Clay Breshears (Intel)May 27, 2009 10:53 AM PDT
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    		 #3 Reply To #1
    Re: Both Directions?
    Quoting - akki


    If that were the case, I'm sure it would have been mentioned in the problem statement...

    That's true.  Such a stipulation would have been mentioned in the problem statement.

    Also, you don't have to look for or match the anti-sense strand either. 

    --clay

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