I wrote a program to check a subsequence in a sequence file. I did it because I had some mistakes in my output compare to the intel program output.
This program display the sequence in the standard output.
The archive contain the program and a makefile. To compile this code just do : make in your terminal
The program take following arguments :- the file name/path.- the sequence name- the first character to check- the last character to check
So you can execute in your terminal :./get_subsequence test_sequence.txt test_sequence_1 50 150
Let me know if you have any problems.
Get a subsequence from a sequence file / sequence name