Article

Classical Molecular Dynamics Simulations with LAMMPS Optimized for Knights Landing

LAMMPS is an open-source software package that simulates classical molecular dynamics. As it supports many energy models and simulation options, its versatility has made it a popular choice. It was first developed at Sandia National Laboratories to use large-scale parallel computation.
Authored by WILLIAM B. (Intel) Last updated on 10/15/2019 - 15:10
Article

Threading Models for High-Performance Computing: Pthreads or OpenMP?

In recent years, Linux* has bolster its presence on the server, due to improved kernel support for threads. Along the way, Linux abandoned its original threading API (called Linux threads) and adopted Pthreads as its native threading interface, joining most of the UNIX variants available today. Linux developers-just like programmers working on UNIX and Windows*-can avail themselves of a second...
Authored by Last updated on 10/15/2019 - 16:40
Article

Combining Linux* Message Passing and Threading in High Performance Computing

An article addressing thread and task parallelism. This article can be used to optimize framework methodology. Written by Andrew Binstock--Principal Analyst at Pacific Data Works LLC and lead author of "Practical Algorithms for Programmers."
Authored by Last updated on 10/15/2019 - 16:40